Endopeptidase EP-1 as a Marker for the Eyespot Resistance Gene Pch-1 from Aegilops ventricosa in Wheat Line 'H-93-70'

Biochemical marker endopeptidase EP-1 was used to determine that an eyespot resistance gene, transferred from Aegilops ventricosa to the hexaploid wheat line ‘H-93-70’ is located on the long arm of the chromosome 7D.     

Dereplication Strategies for Targeted Isolation of New Antitrypanosomal Actinosporins A and B from a Marine Sponge Associated-Actinokineospora sp. EG49

High resolution Fourier transform mass spectrometry (HRFTMS) and nuclear magnetic resonance (NMR) spectroscopy were employed as complementary metabolomic tools to dereplicate the chemical profile of the new and antitrypanosomally active sponge-associated bacterium Actinokineospora sp. EG49 extract. Principal Component (PCA), hierarchical clustering (HCA), and orthogonal partial least square-discriminant analysis (OPLS-DA) were used to evaluate the HRFTMS and NMR data of crude extracts from four different fermentation approaches. Statistical analysis identified the best culture one-strain-many-compounds (OSMAC) condition and extraction procedure, which was used for the isolation of novel bioactive metabolites. As a result, two new O-glycosylated angucyclines, named actinosporins A (1) and B (2), were isolated from the broth culture of Actinokineospora sp. strain EG49, which was cultivated from the Red Sea sponge Spheciospongia vagabunda. The structures of actinosporins A and B were determined by 1D- and 2D-NMR techniques, as well as high resolution tandem mass spectrometry. Testing for antiparasitic properties showed that actinosporin A exhibited activity against Trypanosoma brucei brucei with an IC₅₀ value of 15 µM; however no activity was detected against Leishmania major and Plasmodium falciparum, therefore suggesting its selectivity against the parasite Trypanosoma brucei brucei; the causative agent of sleeping sickness.     

Missing mass in collisional debris from galaxies

Recycled dwarf galaxies can form in the collisional debris of massive galaxies. Theoretical models predict that, contrary to classical galaxies, these recycled galaxies should be free of nonbaryonic dark matter. By analyzing the observed gas kinematics of such recycled galaxies with the help of a numerical model, we demonstrate that they do contain a massive dark component amounting to about twice the visible matter. Staying within the standard cosmological framework, this result most likely indicates the presence of large amounts of unseen, presumably cold, molecular gas. This additional mass should be present in the disks of their progenitor spiral galaxies, accounting for a substantial part of the so-called missing baryons.     

1H NMR based metabolic profiling in the evaluation of Japanese green tea quality

Classification of tea quality is now mainly performed according to the sensory results by professional tea tasters. However, this evaluation method is inconsistent in differentiating their qualities. A combination of a (1)H NMR technique and a multivariate analysis was introduced to the quality evaluation of green tea by means of a metabolomic technique. A broad range of metabolites were detected by (1)H NMR spectrometry. The principal component analysis (PCA) was used to reduce the complexity of the (1)H NMR spectra data set and provided the quality discrimination result. It offered an extensive clue for classification and quality assessment without any prepurification method. A set of green teas from a Japanese tea contest were analyzed by (1)H NMR to classify the quality with respect to that judged by tea tasters and to conceive a quality prediction model. Metabolic profiling and fingerprinting of (1)H NMR spectra of green teas with different quality were studied. PCA showed a separation between the high- and the low-quality green teas. The taste marker compounds contributing to the discrimination of tea quality were identified. Reliable prediction models were obtained by the partial least-squares projection to latent structure (PLS) analysis together with a preprocessing filter of both orthogonal signal correction (OSC) and a combination between OSC and wavelet transform algorithms.     

Priming effects of sugars,amino acids,organic acids and catechol on the mineralization of lignin and peat

The ¹⁴C‐labeled substrates glucose, fructose, alanine, glycine, oxalic acid, acetic acid, and catechol were incubated at 20 °C in a model system that consisted of sand mixed with lignin or peat (3 % C_org). Each substrate was added at either 80 or 400 μg C (g sand)^—1. During 26 days of incubation with an inoculum extracted from forest soil, the amount of CO₂ evolved was measured hourly. The amount of ¹⁴CO₂ was determined after 4, 6, 12, 19, and 26 days. After 26 days of incubation, each substrate showed priming effects, but not in all examined treatments. Most substrates stimulated the degradation of the model substances (positive priming effects). Negative priming effects only were found in the lignin system with oxalic acid and catechol addition at both concentrations. The strongest positive priming occurred in the peat system with the oxalic acid addition of 80 μg C g^—1 where 1.8 % of the peat were mineralized after 26 days, compared to 0.7 % in the control. The addition of 400 μg alanine‐C g^—1 caused the strongest increase in lignin mineralization, amounting to 3.9 % compared to 2.8 % in the control. During the incubation the extent of priming changed with time. Most substrates caused the strongest effects during the first 4 to 10 days of incubation. The extent of priming depended on substrate type, substrate concentration, and organic model substance. Possibly this is due to the activation of different microorganisms.